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Issue 952 #961

Merged
merged 4 commits into from
May 7, 2024
Merged

Issue 952 #961

merged 4 commits into from
May 7, 2024

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wasade
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@wasade wasade commented May 2, 2024

Fixes #952
Fixes qiime2/q2-feature-table#245

@mortonjt, are you able to review?

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mortonjt commented May 2, 2024

Hi, I think this fix is good enough. We just need to keep a mental note that np.ceil is applied to the data before subsampling to ensure that all low-abundance datasets have a chance to be sampled. But given that this is a nuanced technical detail, I'm OK with merging as is.

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wasade commented May 2, 2024

Wonderful, thank you! And good point -- I'll add a mention in the docstring.

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wasade commented May 2, 2024

@mortonjt, please let me know if there are concerns with that text otherwise I'll merge

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mortonjt commented May 2, 2024

LGTM

@wasade wasade merged commit 1119575 into biocore:master May 7, 2024
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